Functional and Comparative Genomics of Disease Resistance Gene Homologs
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  • Michelmore, R.W. (2000). Genomic approaches to plant disease resistance. Curr. Opin. Plant Biol. 3:125-131.  
  • Michelmore, R.W. (2002). Natural and artificial evolution of disease resistance genes. Proc. 10th Int. Congr. Mol. Plant Microbe Interact. pp 23 – 29.  
  • Bai, J., Pennill, L.A., Ning, J., Lee, S.W., Ramalingam, J., Webb C.A., Zhao, B., Sun, Q., Nelson, J.C., Leach J.E. and Hulbert S.H. (2002) Diversity in Nucleotide Binding Site-Leucine-Rich Repeat Genes in Cereals. Genome Research, 12:1871-1884  
  • Kozik, A., Kochetkova, E., Michelmore, R.W. (2002). GenomePixelizer – a visualization program for comparative genomics within and between species. Bioinformatics 18:335-336.  
  • Meyers, B.C., Morgante, M, and Michelmore, R.W. (2002). TIR-X and TIR-NBS proteins: two new families related to disease resistance TIR-NBS-LRR proteins encoded in Arabidopsis and other plant species. Plant Journal 32:77-92.  
  • Mondragón-Palomino, M., Meyers, B.C., Michelmore, R.W., Gaut, B.S. (2002). Patterns of Positive Selection in the Complete NBS-LRR Gene Family of Arabidopsis thaliana. Genome Res. 12: 1305-1315.  
  • Wan, J., F.M. Dunning and A. F. Bent (2002). Probing plant-pathogen interactions and downstream defense signaling using DNA microarrays. Funct. & Integr. Genomics 2: 259-273.  
  • Cannon S.B., Kozik A., Chan B., Michelmore R., Young N.D. (2003). DiagHunter and GenoPix2D: programs for genomic comparisons, large-scale homology-discovery, and visualization. Genome Biology 4:R68.  
  • Meyers, B.C., Kozik, A., Griego, A., Kuang, H. and Michelmore, R.W. (2003). Genome-wide analysis of NBS-LRR-encoding genes in Arabidopsis. Plant Cell 15:809-834      Supplemental Data

  • Quirino, B. F. and A. F. Bent (2003) Deciphering host resistance and pathogen virulence: The Arabidopsis/Pseudomonas interaction as a model. Mol. Plant Pathol. 4:517-530.   
  • Ramalingam, J., Vera Cruz, C.M., Kukreja K., Chittoor J.M., Wu J.-L., Lee, S.W., Baraoidan, M., George M.L., Cohen M.B., Hulbert S.H , Leach, J.E., and Leung H. (2003) Candidate defense genes from rice, barley, and maize and their association with qualitative and quantitative resistance in rice. Mol. Plant Microbe Int. 16:14-24.  
  • Leach, J.E., B. Liu, G. Ponciano, K. Webb, J. Wu, C. Vera Cruz, and H. Leung. (2004). Approaches to achieve durable resistance. Pages 263-269 in Proceedings of the XI International Congress on Molecular Plant-Microbe Interactions, St. Petersburg, Russia. IS-MPMI Press, Minneapolis, MN  
  • Leach, J.E., B. Liu, P. Manosalva, C. Wu, J. Wu, A. Bordeos, J. Bai, S. Lee, M. Ryba-White, M. Bruce, S. Hulbert, C. Hopkins, C. Verz Cruz, and H. Leung. (2004). Dissection of durable resistance in rice. Pages 164-173 in Tsuyumu, S., Leach, J. Shiraishi, T., Wolpert, T., editors. Genomic and Genetic Analysis of Plant Parasitism and Defense. APS Press, Minneapolis, MN.  
  • Liu, B., S.H. Zhang, X.Y. Zhu, Q. Yang, S. Wu, M. Mei, R. Mauleon, J.E. Leach, T. Mew, and H. Leung. (2004). Candidate defense genes as predictors of quantitative disease resistance in rice. Mol. Plant Microbe Interact. 17:1146-1152.  
  • Monosi, B., Wisser R. J., Pennill, L. and S.H. Hulbert (2004) Full-Genome analysis of resistance gene homologs in rice. Theor. Appl. Genet. 109:1434-1447.  
  • Wu, J., P. Sinha, M. Vairar, K. Zheng, J.E. Leach, B. Courtois, and H. Leung. (2004). Association between candidate genes and blast resistance in an advanced backcross population of rice. Theor. Appl Genet. 108:1024-1032.  
  • Zhao, B., Ardales, E.Y., Brasset, E., Claflin, L.E., Leach, J.E., Hulbert, S.H. (2004) The Rxo1/Rba1 locus of maize controls resistance reactions to pathogenic and nonhost bacteria. Theor. Appl. Genet. 109:71-79.  
  • Wisser, R.J., Sun, Q., Hulbert, S.H., Kresovich, S., Nelson, R.J. (2005) Identification and Characterization of Regions of the Rice Genome Associated with Broad-Spectrum, Quantitative Disease Resistance. Genetics 169:2277-93.  
  • McHale, L., Tan, X., Koehl, P., Michelmore, R.W. (2006). Plant NBS-LRR proteins: adaptable guards. Genome Biology 7:212.      Supplemental Data

  • Tan, X., Meyers, B.C., Kozik, A., Morgante, M., West, M., St Clair, D., Bent, A., & Michelmore, R.W. (2007). Global Expression Analysis of NBS-LRR Encoding Genes in Arabidopsis. BMC Plant Biology.      Supplemental Data

  • Adams-Phillips, L., Wan, J., Tan, X., Dunning, M., Meyers, B., Michelmore, R, & Bent, A. (2008). Discovery of ADP-ribosylation and other plant defense pathway elements through expression profiling of four different Arabidopsis-Pseudomonas R/avr interactions. Mol. Plant-Microbe Interact. 21:646-657.      Supplemental Data

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